STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FG91_00033Hypothetical protein. (263 aa)    
Predicted Functional Partners:
FG91_00032
Ribosomal protein S6 modification protein; Belongs to the RimK family.
       0.773
FG91_00031
Diguanylate cyclase.
       0.444
FG91_01694
Siroheme synthase-like protein.
    
  0.435
Your Current Organism:
Sphingopyxis sp. LC81
NCBI taxonomy Id: 1502850
Other names: S. sp. LC81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.