STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FG94_00411Putative multicopper oxidase. (464 aa)    
Predicted Functional Partners:
FG94_00412
Outer membrane efflux protein.
 
   
 0.944
FG94_00410
Signal peptide protein.
 
   
 0.916
copB2
Copper resistance protein B.
  
  
 0.911
FG94_03379
Putative cytochrome c5.
    
 
 0.881
mauC
Amicyanin precursor.
   
 0.859
FG94_03654
Hypothetical protein.
   
 0.859
FG94_04209
Hypothetical protein.
   
 0.859
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.856
tatB
Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
   
 
 0.837
FG94_04189
Signal peptide protein.
 
   
 0.791
Your Current Organism:
Massilia sp. LC238
NCBI taxonomy Id: 1502852
Other names: M. sp. LC238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.