STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FG94_04706Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)    
Predicted Functional Partners:
FG94_04287
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.859
FG94_04707
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.844
FG94_03822
Poly(R)-hydroxyalkanoic acid synthase, class I.
  
  
 0.827
FG94_00819
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.826
FG94_00816
Malonyl CoA-acyl carrier protein transacylase.
 0.823
FG94_00935
Polyhydroxyalkanoic acid synthase.
  
  
 0.795
FG94_02906
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 0.785
FG94_03944
Hypothetical protein.
   
 0.785
gltB
Glutamate synthase [NADPH] large subunit GltB.
     
 0.762
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.759
Your Current Organism:
Massilia sp. LC238
NCBI taxonomy Id: 1502852
Other names: M. sp. LC238
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