STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF07965.1Transcriptional regulator, TetR family. (203 aa)    
Predicted Functional Partners:
KNF07966.1
Putative exporter of the RND superfamily.
 
     0.931
KNF07967.1
Hypothetical protein.
 
  
 0.882
KNF07077.1
Hypothetical protein.
    
 
 0.462
atoS
Signal transduction histidine-protein kinase AtoS.
    
 
 0.440
KNF07962.1
Putative transcriptional regulator.
     
 0.416
KNF07963.1
ABC-type multidrug transport system, ATPase component.
       0.413
KNF07964.1
Hypothetical protein.
       0.413
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.