STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08062.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
KNF08061.1
Hypothetical protein.
       0.664
KNF08060.1
Hypothetical protein.
      
0.601
KNF08059.1
Hypothetical protein.
      
0.546
KNF08063.1
Hypothetical protein.
       0.519
KNF08064.1
Hypothetical protein.
       0.519
KNF08065.1
Hypothetical protein.
       0.489
KNF08066.1
Hypothetical protein.
       0.489
KNF08067.1
Hypothetical protein.
       0.440
KNF08068.1
Hypothetical protein.
       0.440
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.