STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08072.1PAS/PAC sensor signal transduction histidine kinase. (834 aa)    
Predicted Functional Partners:
lpdA
Dihydrolipoyl dehydrogenase LpdA.
    
 0.961
atoS
Signal transduction histidine-protein kinase AtoS.
 
 
0.957
KNF07077.1
Hypothetical protein.
   
 0.929
KNF08073.1
Response regulator.
 
 
 0.927
KNF09626.1
Response regulator.
   
 0.919
KNF09198.1
Sensor signal transduction histidine kinase.
 
0.868
resE
Sensor histidine kinase ResE.
 
  
0.855
pleD
Response regulator PleD.
 0.831
KNF07693.1
Putative pyridoxal phosphate-dependent acyltransferase.
  
 0.793
cheB2
Chemotaxis response regulator protein-glutamate methylesterase 2.
   
 0.773
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.