STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08075.1Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM. (267 aa)    
Predicted Functional Partners:
xdhD
Putative hypoxanthine oxidase XdhD.
 
 0.988
KNF08076.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS.
 
 0.984
xdhD-2
Putative hypoxanthine oxidase XdhD.
 
 0.951
ndhS
Nicotinate dehydrogenase small FeS subunit.
 
 0.934
ndhM
Nicotinate dehydrogenase medium molybdopterin subunit.
 
 0.882
sfrB
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.855
pucD
Putative xanthine dehydrogenase subunit D.
 
 0.841
cutC
Glyceraldehyde dehydrogenase small chain CutC.
  
 0.832
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC.
 
 
 0.829
KNF07099.1
Molybdenum hydroxylase accessory protein, YgfJ family.
 
 
 0.759
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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