STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF07872.1Spermidine/putrescine-binding periplasmic protein. (356 aa)    
Predicted Functional Partners:
KNF07868.1
ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.907
KNF07867.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.904
KNF07869.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.868
potB
Spermidine/putrescine transport system permease protein PotB.
  
 
 0.792
KNF07878.1
Adenine deaminase.
 
     0.789
potC
Spermidine/putrescine transport system permease protein PotC.
  
 
 0.764
KNF07259.1
ABC-type spermidine/putrescine transport system, permease component II.
  
 
 0.589
potA-2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.553
KNF09605.1
ABC-type Fe3+ transport system, periplasmic component.
  
  
  0.516
KNF07258.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 
 0.513
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.