STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livK2ABC transporter branched-chain amino acid-binding protein LivK. (379 aa)    
Predicted Functional Partners:
KNF07475.1
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
livG2
High-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG.
 
 
 0.993
livH2
High-affinity branched-chain amino acid ABC transporter system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
livF2
High-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF.
 
 
 0.988
KNF10027.1
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
livH1
High-affinity branched-chain amino acid ABC transporter system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
livF1
High-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF.
 
 
  0.865
livG1
High-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG.
 
  
  0.863
livK1
ABC transporter branched-chain amino acid-binding protein LivK.
  
  
 
0.837
KNF07694.1
Urease, beta subunit.
     
 0.549
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.