STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09857.1Type IV leader peptidase family. (196 aa)    
Predicted Functional Partners:
tapC
Type IV pilus assembly protein TapC.
  
  
 0.804
tapB
Type IV pilus assembly protein TapB.
  
 
 0.749
KNF09858.1
Hypothetical protein.
     
 0.728
KNF09370.1
DNA internalization-like competence protein ComEC/Rec2.
  
  
 0.681
aroE
Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
    0.637
pilT
Twitching mobility protein PilT.
     
 0.634
dprA
DNA protecting protein DprA.
  
  
 0.564
KNF07385.1
Hypothetical protein.
  
  
 0.514
KNF09428.1
Hypothetical protein.
   
  
 0.510
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.500
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (28%) [HD]