Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KNF07438.1 | KNF09927.1 | CLPU_17c00630 | CLPU_1c00920 | Putative rRNA methylase. | Cell division protein. | 0.746 |
KNF07438.1 | mraZ | CLPU_17c00630 | CLPU_1c00940 | Putative rRNA methylase. | Transcriptional regulator MraZ; Belongs to the MraZ family. | 0.796 |
KNF09927.1 | KNF07438.1 | CLPU_1c00920 | CLPU_17c00630 | Cell division protein. | Putative rRNA methylase. | 0.746 |
KNF09927.1 | ftsK | CLPU_1c00920 | CLPU_5c01850 | Cell division protein. | DNA translocase FtsK. | 0.520 |
KNF09927.1 | mraZ | CLPU_1c00920 | CLPU_1c00940 | Cell division protein. | Transcriptional regulator MraZ; Belongs to the MraZ family. | 0.798 |
KNF09927.1 | murD | CLPU_1c00920 | CLPU_1c00880 | Cell division protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.525 |
KNF09927.1 | murG | CLPU_1c00920 | CLPU_1c00860 | Cell division protein. | UDP-N-acetylglucosamine transferase MurG; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.510 |
KNF09927.1 | rsmH | CLPU_1c00920 | CLPU_1c00930 | Cell division protein. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.910 |
KNF09927.1 | spoVD1 | CLPU_1c00920 | CLPU_1c00910 | Cell division protein. | Stage V sporulation protein D. | 0.900 |
fliE | fliS | CLPU_5c01160 | CLPU_2c00890 | Flagellar hook-basal body complex protein FliE. | Flagellar protein FliS. | 0.984 |
fliE | mraZ | CLPU_5c01160 | CLPU_1c00940 | Flagellar hook-basal body complex protein FliE. | Transcriptional regulator MraZ; Belongs to the MraZ family. | 0.610 |
fliS | fliE | CLPU_2c00890 | CLPU_5c01160 | Flagellar protein FliS. | Flagellar hook-basal body complex protein FliE. | 0.984 |
fliS | mraZ | CLPU_2c00890 | CLPU_1c00940 | Flagellar protein FliS. | Transcriptional regulator MraZ; Belongs to the MraZ family. | 0.610 |
ftsK | KNF09927.1 | CLPU_5c01850 | CLPU_1c00920 | DNA translocase FtsK. | Cell division protein. | 0.520 |
ftsK | mraZ | CLPU_5c01850 | CLPU_1c00940 | DNA translocase FtsK. | Transcriptional regulator MraZ; Belongs to the MraZ family. | 0.609 |
ftsK | murG | CLPU_5c01850 | CLPU_1c00860 | DNA translocase FtsK. | UDP-N-acetylglucosamine transferase MurG; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.594 |
ftsK | spoVD1 | CLPU_5c01850 | CLPU_1c00910 | DNA translocase FtsK. | Stage V sporulation protein D. | 0.457 |
mraZ | KNF07438.1 | CLPU_1c00940 | CLPU_17c00630 | Transcriptional regulator MraZ; Belongs to the MraZ family. | Putative rRNA methylase. | 0.796 |
mraZ | KNF09927.1 | CLPU_1c00940 | CLPU_1c00920 | Transcriptional regulator MraZ; Belongs to the MraZ family. | Cell division protein. | 0.798 |
mraZ | fliE | CLPU_1c00940 | CLPU_5c01160 | Transcriptional regulator MraZ; Belongs to the MraZ family. | Flagellar hook-basal body complex protein FliE. | 0.610 |
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