STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF10049.1Hypothetical protein. (555 aa)    
Predicted Functional Partners:
KNF10050.1
Hypothetical protein.
  
  
 0.873
KNF10052.1
Protein of unknown function DUF2634; Hypothetical protein DUF2634.
  
  
 0.869
KNF10056.1
Phage protein.
  
    0.793
KNF10053.1
Protein of unknown function DUF2577; Hypothetical protein DUF2577.
       0.779
KNF10054.1
Hypothetical protein.
  
    0.779
KNF10051.1
Hypothetical protein.
       0.777
xkdP
Phage-like element PBSX protein XkdP.
       0.777
KNF08563.1
Phage-like baseplate assembly protein.
  
  
 0.642
KNF08561.1
Hypothetical protein.
  
  
 0.634
KNF08559.1
Hypothetical protein.
  
  
 0.628
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.