STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF07259.1ABC-type spermidine/putrescine transport system, permease component II. (276 aa)    
Predicted Functional Partners:
KNF07260.1
ABC-type spermidine/putrescine transport system, permease component II.
 
0.994
KNF07261.1
ABC-type uncharacterized transport system, periplasmic component.
 
  
  0.962
KNF07258.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.940
potA-2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.914
potD
Spermidine/putrescine-binding periplasmic protein PotD.
 
 0.894
KNF07254.1
4Fe-4S dicluster domain.
 
     0.860
KNF07255.1
Phosphotransferase enzyme family.
 
     0.859
KNF07253.1
Fe-S oxidoreductase.
 
     0.843
KNF07869.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.811
modC
Molybdate ABC transporter ATP-binding protein ModC; Belongs to the ABC transporter superfamily.
 
 
 0.800
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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