STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF07174.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
KNF07172.1
Hypothetical protein.
 
  
 0.950
KNF07176.1
Protein of unknown function DUF2634; Hypothetical protein DUF2634.
 
    0.950
KNF07173.1
LysM domain-containing protein.
 
  
 0.949
KNF07177.1
Hypothetical protein.
 
     0.948
KNF07178.1
Hypothetical protein.
 
    0.948
KNF07170.1
Protein of unknown function DUF2001; Hypothetical protein DUF2001.
 
     0.860
KNF07169.1
Phage tail sheath protein.
 
    0.856
KNF10056.1
Phage protein.
 
  
 0.807
KNF10052.1
Protein of unknown function DUF2634; Hypothetical protein DUF2634.
 
    0.789
xkdP
Phage-like element PBSX protein XkdP.
 
  
 0.784
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.