STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norVAnaerobic nitric oxide reductase flavorubredoxin NorV. (406 aa)    
Predicted Functional Partners:
nasD-2
Nitrite reductase NasD.
 
  
 0.935
dnaC
Replicative DNA helicase DnaC; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.605
rutF1
NADPH-dependent FMN reductase RutF.
 
 
  0.594
hcp
Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
  
 0.573
KNF07881.1
Rubredoxin.
 
  
 0.530
KNF09013.1
NADPH-dependent FMN reductase.
 
 
  0.513
KNF07774.1
Desulfoferrodoxin, ferrous iron-binding domain.
  
  
 0.508
KNF09953.1
NADPH-dependent FMN reductase.
 
 
  0.476
rbr-2
Rubrerythrin.
 
  
 0.474
KNF09380.1
Putative bacteriohemerythrin.
  
  
 0.465
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.