STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF07081.1ABC-type proline/glycine betaine transport system, ATPase component. (366 aa)    
Predicted Functional Partners:
KNF07083.1
Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system.
 0.999
KNF07082.1
ABC-type proline/glycine betaine transport system, permease component.
 0.994
KNF07080.1
ABC-type proline/glycine betaine transport system, permease component.
 0.993
KNF09005.1
ABC-type multidrug transport system, ATPase and permease component.
 
     
0.897
KNF09503.1
ABC-type multidrug transport system, ATPase and permease component.
 
     
0.869
KNF07633.1
ABC transporter-like protein.
 
     
0.842
oppC
Oligopeptide transport system, permease protein OppC.
 
      0.780
KNF07312.1
Peptide ABC transporter permease protein.
 
      0.709
KNF07241.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
      0.669
yvgM
Putative molybdenum transport system permease protein YvgM; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.647
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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