STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ade1Adenine deaminase 1; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. (604 aa)    
Predicted Functional Partners:
punA
Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
 0.896
apt
Adenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
 0.866
hpt
Hypoxanthine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.806
ade1-2
Adenine deaminase 1; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
  
  
 
0.804
KNF07039.1
Ethanolamine utilization EutN/carboxysome family protein.
       0.723
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
  
 0.656
KNF07040.1
Flavoprotein.
       0.633
lhyD
L-hydantoinase LhyD.
 
     0.589
pucD
Putative xanthine dehydrogenase subunit D.
 
  
 0.547
KNF07097.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
  
 0.539
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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