STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09619.1Protein of unknown function DUF2877; Hypothetical protein DUF2877. (318 aa)    
Predicted Functional Partners:
pucR
Purine catabolism regulatory protein PucR.
 
     0.678
KNF09618.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.576
KNF09617.1
ABC-type antimicrobial peptide transport system, ATPase component.
       0.572
macB
Macrolide export ATP-binding/permease protein MacB.
       0.531
KNF10035.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.473
KNF09620.1
Sodium:alanine symporter family protein.
       0.450
KNF09615.1
Hypothetical protein.
       0.425
KNF07260.1
ABC-type spermidine/putrescine transport system, permease component II.
  
     0.403
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.