Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KNF09759.1Putative extracellular nuclease. (838 aa)    
Predicted Functional Partners:
ushA
Bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor UshA; Belongs to the 5'-nucleotidase family.
 
  
  0.946
KNF09690.1
S-layer domain-containing protein.
  
 0.872
KNF09283.1
NUDIX hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
  
 
 0.805
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
   
 
  0.797
KNF10154.1
Phosphoribulokinase/uridine kinase.
  
 
  0.784
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.772
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
    
 0.762
KNF07724.1
Putative NADH oxidase; Belongs to the sulfur carrier protein TusA family.
    
 0.708
hemD
Porphyrin biosynthesis protein HemD.
    
  0.700
KNF09688.1
S-layer domain-containing protein.
   
 0.662
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.