Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spoIID1Stage II sporulation protein D. (475 aa)    
Predicted Functional Partners:
KNF10048.1
N-acetylmuramoyl-L-alanine amidase.
 
0.700
KNF08570.1
N-acetylmuramoyl-L-alanine amidase.
 
0.699
KNF09293.1
N-acetylmuramoyl-L-alanine amidase.
 
0.690
KNF07834.1
N-acetylmuramoyl-L-alanine amidase.
 
0.689
KNF07853.1
Hypothetical protein.
  
 
 0.650
cwlD
Germination-specific N-acetylmuramoyl-L-alanine amidase CwlD.
  
 
 
0.614
KNF09864.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 
0.612
spoVD1
Stage V sporulation protein D.
 
 
 0.583
KNF07233.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 
0.572
KNF10181.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 
0.570
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.