Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tlpAMethyl-accepting chemotaxis protein TlpA. (600 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
 0.943
KNF09485.1
Chemotaxis protein, CheW-like protein.
 
 0.897
cheW2
Chemotaxis protein CheW.
 
 0.891
atoS
Signal transduction histidine-protein kinase AtoS.
  
 0.887
cheB2
Chemotaxis response regulator protein-glutamate methylesterase 2.
 
 0.870
cheR
Chemotaxis protein methyltransferase CheR.
 
 0.851
KNF07077.1
Hypothetical protein.
   
 0.793
cheD
Putative chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.732
KNF09626.1
Response regulator.
  
 0.694
fliY
Flagellar motor switch phosphatase FliY.
 
 0.663
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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