Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KNF07026.1 | KNF07027.1 | CLPU_31c00030 | CLPU_31c00040 | Two component transcriptional regulator. | Signal transduction histidine kinase. | 0.967 |
KNF07026.1 | KNF07077.1 | CLPU_31c00030 | CLPU_26c00020 | Two component transcriptional regulator. | Hypothetical protein. | 0.938 |
KNF07026.1 | atoS | CLPU_31c00030 | CLPU_2c00780 | Two component transcriptional regulator. | Signal transduction histidine-protein kinase AtoS. | 0.969 |
KNF07026.1 | gtcS | CLPU_31c00030 | CLPU_9c00140 | Two component transcriptional regulator. | Sensor protein GtcS. | 0.864 |
KNF07026.1 | resE-3 | CLPU_31c00030 | CLPU_4c00210 | Two component transcriptional regulator. | Sensor histidine kinase ResE. | 0.912 |
KNF07026.1 | resE-4 | CLPU_31c00030 | CLPU_8c00010 | Two component transcriptional regulator. | Sensor histidine kinase ResE. | 0.965 |
KNF07026.1 | todS | CLPU_31c00030 | CLPU_2c00190 | Two component transcriptional regulator. | Sensor histidine kinase TodS. | 0.901 |
KNF07026.1 | todS1 | CLPU_31c00030 | CLPU_2c00200 | Two component transcriptional regulator. | Sensor histidine kinase TodS. | 0.905 |
KNF07026.1 | todS2 | CLPU_31c00030 | CLPU_2c00210 | Two component transcriptional regulator. | Sensor histidine kinase TodS. | 0.898 |
KNF07026.1 | vanS | CLPU_31c00030 | CLPU_28c00080 | Two component transcriptional regulator. | Vancomycin sensor histidine kinase VanS. | 0.907 |
KNF07027.1 | KNF07026.1 | CLPU_31c00040 | CLPU_31c00030 | Signal transduction histidine kinase. | Two component transcriptional regulator. | 0.967 |
KNF07027.1 | KNF07077.1 | CLPU_31c00040 | CLPU_26c00020 | Signal transduction histidine kinase. | Hypothetical protein. | 0.908 |
KNF07027.1 | atoS | CLPU_31c00040 | CLPU_2c00780 | Signal transduction histidine kinase. | Signal transduction histidine-protein kinase AtoS. | 0.930 |
KNF07027.1 | gtcS | CLPU_31c00040 | CLPU_9c00140 | Signal transduction histidine kinase. | Sensor protein GtcS. | 0.458 |
KNF07027.1 | resE-3 | CLPU_31c00040 | CLPU_4c00210 | Signal transduction histidine kinase. | Sensor histidine kinase ResE. | 0.623 |
KNF07027.1 | resE-4 | CLPU_31c00040 | CLPU_8c00010 | Signal transduction histidine kinase. | Sensor histidine kinase ResE. | 0.595 |
KNF07027.1 | todS | CLPU_31c00040 | CLPU_2c00190 | Signal transduction histidine kinase. | Sensor histidine kinase TodS. | 0.620 |
KNF07027.1 | todS1 | CLPU_31c00040 | CLPU_2c00200 | Signal transduction histidine kinase. | Sensor histidine kinase TodS. | 0.624 |
KNF07027.1 | todS2 | CLPU_31c00040 | CLPU_2c00210 | Signal transduction histidine kinase. | Sensor histidine kinase TodS. | 0.621 |
KNF07027.1 | vanS | CLPU_31c00040 | CLPU_28c00080 | Signal transduction histidine kinase. | Vancomycin sensor histidine kinase VanS. | 0.505 |
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