STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF07006.1Phage major tail protein, phi13 family. (196 aa)    
Predicted Functional Partners:
KNF07008.1
Phage protein, HK97 gp10 family.
 
    0.910
KNF07003.1
Phage tail tape measure protein, TP901 family, core region.
 
     0.746
KNF08444.1
Phage major tail protein, phi13 family.
  
     0.736
KNF07007.1
Protein of unknown function DUF3168; Hypothetical protein DUF3168.
  
    0.645
KNF07005.1
Hypothetical protein.
       0.634
KNF06981.1
Phage-like minor tail protein.
 
    0.617
KNF06960.1
Putative phage tail protein.
 
    0.612
KNF07010.1
Putative phage protein.
  
    0.601
KNF07009.1
Phage head-tail adaptor, putative, SPP1 family.
       0.585
KNF06972.1
Phage-like protein.
 
   
 0.577
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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