STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09283.1NUDIX hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (146 aa)    
Predicted Functional Partners:
gldA
Glycerol dehydrogenase.
  
 
 0.882
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
  
 0.875
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
    
 0.841
nifJ-2
Pyruvate-flavodoxin oxidoreductase NifJ.
    
 0.841
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
  
 
 0.841
KNF07704.1
Haloacid dehalogenase superfamily, subfamily IA.
  
 
 0.828
KNF07705.1
Hypothetical protein.
  
 
 0.828
KNF09331.1
Haloacid dehalogenase domain protein hydrolase.
  
 
 0.828
plsY
Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
    
  0.806
KNF07850.1
Hypothetical protein.
    
  0.805
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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