STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09312.1Phage terminase, large subunit, PBSX family. (421 aa)    
Predicted Functional Partners:
KNF09311.1
Phage portal protein, SPP1 family.
 
  
 0.929
KNF07158.1
Phage terminase, small subunit.
 
  
 0.852
KNF09313.1
Hypothetical protein.
       0.773
KNF09310.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.744
KNF07160.1
Phage portal protein, SPP1 family.
 
  
 0.677
KNF07164.1
Hypothetical protein.
 
    0.538
KNF07167.1
Bacteriophage HK97-gp10, putative tail-component.
 
    0.483
KNF07161.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.473
KNF07163.1
Phage minor structural protein GP20.
 
    0.456
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.