STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09350.1N-acetylmuramoyl-L-alanine amidase. (355 aa)    
Predicted Functional Partners:
KNF10048.1
N-acetylmuramoyl-L-alanine amidase.
  
0.622
KNF09293.1
N-acetylmuramoyl-L-alanine amidase.
  
0.621
KNF07834.1
N-acetylmuramoyl-L-alanine amidase.
  
0.619
KNF08570.1
N-acetylmuramoyl-L-alanine amidase.
  
0.615
spoIID1
Stage II sporulation protein D.
  
 
0.544
yqfC
Sporulation protein YqfC.
     
 0.492
yqfD
Sporulation protein YqfD.
     
 0.478
cwlD
Germination-specific N-acetylmuramoyl-L-alanine amidase CwlD.
  
  
 
0.472
KNF09864.1
N-acetylmuramoyl-L-alanine amidase.
  
  
 
0.471
KNF09351.1
GatB/YqeY domain-containing protein.
       0.455
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.