STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09393.1His kinase A. (473 aa)    
Predicted Functional Partners:
resD
Transcriptional regulatory protein ResD.
  0.963
atoS
Signal transduction histidine-protein kinase AtoS.
 
 
0.924
KNF07077.1
Hypothetical protein.
   
 0.908
kdpD
Sensor protein KdpD.
 
  
  0.903
KNF09046.1
Two-component system signal transduction response regulator.
  
  0.826
KNF08200.1
Signal transduction response regulator.
 
  0.805
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.803
vanR-5
Regulatory protein VanR.
 
  0.784
srrA-2
Transcriptional regulatory protein SrrA.
 
  0.776
KNF09040.1
Hypothetical protein.
 
  0.771
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.