STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09421.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
nox
NADH oxidase.
     0.921
nasD-2
Nitrite reductase NasD.
 
     0.880
KNF07724.1
Putative NADH oxidase; Belongs to the sulfur carrier protein TusA family.
 
 
0.764
KNF09422.1
Universal stress protein family.
       0.584
nasD
Ferredoxin--nitrite reductase NasD.
  
 
 0.582
KNF07194.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.491
yedF
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
  
 
 0.491
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.