Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KNF09433.1 | KNF09436.1 | CLPU_3c02120 | CLPU_3c02150 | Hypothetical protein. | RNA-binding, CRM domain-containing protein. | 0.666 |
| KNF09433.1 | aroE | CLPU_3c02120 | CLPU_1c00270 | Hypothetical protein. | Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.633 |
| KNF09433.1 | cinA | CLPU_3c02120 | CLPU_5c01890 | Hypothetical protein. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.840 |
| KNF09433.1 | nadD | CLPU_3c02120 | CLPU_3c02130 | Hypothetical protein. | Putative nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.996 |
| KNF09433.1 | nadE | CLPU_3c02120 | CLPU_3c00230 | Hypothetical protein. | NH(3)-dependent NAD(+) synthetase NadE; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.558 |
| KNF09433.1 | nadK | CLPU_3c02120 | CLPU_3c02890 | Hypothetical protein. | NAD kinase NadK; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.474 |
| KNF09433.1 | obg | CLPU_3c02120 | CLPU_3c02160 | Hypothetical protein. | GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.406 |
| KNF09433.1 | pncB | CLPU_3c02120 | CLPU_3c02530 | Hypothetical protein. | Nicotinate phosphoribosyltransferase PncB; Belongs to the NAPRTase family. | 0.620 |
| KNF09433.1 | rsfS | CLPU_3c02120 | CLPU_3c02100 | Hypothetical protein. | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.975 |
| KNF09436.1 | KNF09433.1 | CLPU_3c02150 | CLPU_3c02120 | RNA-binding, CRM domain-containing protein. | Hypothetical protein. | 0.666 |
| KNF09436.1 | aroE | CLPU_3c02150 | CLPU_1c00270 | RNA-binding, CRM domain-containing protein. | Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.821 |
| KNF09436.1 | nadD | CLPU_3c02150 | CLPU_3c02130 | RNA-binding, CRM domain-containing protein. | Putative nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.878 |
| KNF09436.1 | obg | CLPU_3c02150 | CLPU_3c02160 | RNA-binding, CRM domain-containing protein. | GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.750 |
| KNF09436.1 | rsfS | CLPU_3c02150 | CLPU_3c02100 | RNA-binding, CRM domain-containing protein. | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.710 |
| aroE | KNF09433.1 | CLPU_1c00270 | CLPU_3c02120 | Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Hypothetical protein. | 0.633 |
| aroE | KNF09436.1 | CLPU_1c00270 | CLPU_3c02150 | Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | RNA-binding, CRM domain-containing protein. | 0.821 |
| aroE | nadD | CLPU_1c00270 | CLPU_3c02130 | Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.777 |
| aroE | rsfS | CLPU_1c00270 | CLPU_3c02100 | Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.451 |
| cinA | KNF09433.1 | CLPU_5c01890 | CLPU_3c02120 | Competence damage-inducible protein A; Belongs to the CinA family. | Hypothetical protein. | 0.840 |
| cinA | nadC | CLPU_5c01890 | CLPU_33c00040 | Competence damage-inducible protein A; Belongs to the CinA family. | Putative nicotinate-nucleotide pyrophosphorylase NadC; Belongs to the NadC/ModD family. | 0.908 |
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