STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mobCBacterial mobilization protein MobC. (120 aa)    
Predicted Functional Partners:
KNF07693.1
Putative pyridoxal phosphate-dependent acyltransferase.
   
 0.929
KNF07724.1
Putative NADH oxidase; Belongs to the sulfur carrier protein TusA family.
  
 
 0.836
nasD
Ferredoxin--nitrite reductase NasD.
     
 0.828
KNF08985.1
Hypothetical protein.
  
 0.797
KNF07651.1
Putative flavoredoxin.
  
 
 0.604
KNF09081.1
Hypothetical protein.
  
 
 0.604
KNF08072.1
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.569
KNF10081.1
Acetylene hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.543
nasD-2
Nitrite reductase NasD.
    
 0.529
KNF07905.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
  
 
 0.521
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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