STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscS-2Cysteine desulfurase IscS. (385 aa)    
Predicted Functional Partners:
iscU2
Iron-sulfur cluster assembly scaffold protein IscU 2.
 
 0.995
thiI
Putative tRNA sulfurtransferase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 0.988
KNF07724.1
Putative NADH oxidase; Belongs to the sulfur carrier protein TusA family.
   
 0.983
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
 0.977
KNF07194.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
   
 0.937
iscR
HTH-type transcriptional regulator IscR.
 
 0.914
selD
Selenide, water dikinase SelD; Synthesizes selenophosphate from selenide and ATP.
   
 0.902
nasD
Ferredoxin--nitrite reductase NasD.
  
 0.878
KNF10081.1
Acetylene hydratase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
  0.856
moeB
Molybdopterin-synthase adenylyltransferase.
   
 0.838
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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