STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08962.1ABC-type transport system, involved in lipoprotein release, permease component. (733 aa)    
Predicted Functional Partners:
KNF08963.1
ABC-type antimicrobial peptide transport system, ATPase component.
 
  0.973
KNF08197.1
ABC-type antimicrobial peptide transport system, ATPase component.
 
  0.875
KNF09002.1
ABC transporter ATP-binding/permease protein.
 
 0.841
KNF08961.1
Transcriptional regulator, TetR family.
       0.741
KNF09564.1
ABC transporter ATP-binding protein.
 
  0.584
KNF07672.1
ABC transporter ATP-binding protein.
 
  0.583
KNF07749.1
ABC transporter ATP-binding protein.
  
  0.528
KNF09018.1
ABC transporter ATP-binding protein.
  
  0.528
KNF08268.1
ABC transporter ATP-binding protein.
  
  0.528
KNF07754.1
ABC-type antimicrobial peptide transport system, ATPase component.
   
  0.520
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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