STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08989.1XdhC rossmann domain/XdhC and CoxI family. (361 aa)    
Predicted Functional Partners:
KNF07098.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family.
   
 0.894
KNF07099.1
Molybdenum hydroxylase accessory protein, YgfJ family.
 
 
 0.887
KNF10210.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.886
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 
 0.874
ndhM
Nicotinate dehydrogenase medium molybdopterin subunit.
 
 
 0.863
ndhS
Nicotinate dehydrogenase small FeS subunit.
 
 
 0.862
cutC
Glyceraldehyde dehydrogenase small chain CutC.
 
 
 0.862
KNF08076.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS.
 
 
 0.859
pucD
Putative xanthine dehydrogenase subunit D.
 
 
 0.858
xdhD-2
Putative hypoxanthine oxidase XdhD.
 
 
 0.839
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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