STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09099.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
KNF07650.1
Transcriptional regulatory protein.
  
 0.561
KNF09846.1
Putative transcriptional regulator.
  
 0.561
KNF09651.1
Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.547
KNF07693.1
Putative pyridoxal phosphate-dependent acyltransferase.
     
 0.535
metG
methionine--tRNA ligase MetG; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.518
KNF09179.1
Glycosyltransferase.
  
 
 0.511
metH4
Methionine synthase.
    
  0.463
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.463
KNF09604.1
Nucleoside-diphosphate-sugar epimerase.
  
 
 0.457
KNF09527.1
Transcriptional regulator/sugar kinase.
    
 0.443
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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