Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KNF07650.1 | KNF07693.1 | CLPU_14c00680 | CLPU_13c00350 | Transcriptional regulatory protein. | Putative pyridoxal phosphate-dependent acyltransferase. | 0.561 |
KNF07650.1 | KNF09099.1 | CLPU_14c00680 | CLPU_4c01450 | Transcriptional regulatory protein. | Hypothetical protein. | 0.561 |
KNF07650.1 | KNF09846.1 | CLPU_14c00680 | CLPU_1c00110 | Transcriptional regulatory protein. | Putative transcriptional regulator. | 0.533 |
KNF07650.1 | metG | CLPU_14c00680 | CLPU_2c02690 | Transcriptional regulatory protein. | methionine--tRNA ligase MetG; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.794 |
KNF07693.1 | KNF07650.1 | CLPU_13c00350 | CLPU_14c00680 | Putative pyridoxal phosphate-dependent acyltransferase. | Transcriptional regulatory protein. | 0.561 |
KNF07693.1 | KNF09099.1 | CLPU_13c00350 | CLPU_4c01450 | Putative pyridoxal phosphate-dependent acyltransferase. | Hypothetical protein. | 0.535 |
KNF07693.1 | KNF09179.1 | CLPU_13c00350 | CLPU_4c02250 | Putative pyridoxal phosphate-dependent acyltransferase. | Glycosyltransferase. | 0.734 |
KNF07693.1 | KNF09604.1 | CLPU_13c00350 | CLPU_2c00550 | Putative pyridoxal phosphate-dependent acyltransferase. | Nucleoside-diphosphate-sugar epimerase. | 0.969 |
KNF07693.1 | KNF09651.1 | CLPU_13c00350 | CLPU_2c01020 | Putative pyridoxal phosphate-dependent acyltransferase. | Glycosyltransferases involved in cell wall biogenesis. | 0.890 |
KNF07693.1 | KNF09846.1 | CLPU_13c00350 | CLPU_1c00110 | Putative pyridoxal phosphate-dependent acyltransferase. | Putative transcriptional regulator. | 0.561 |
KNF07693.1 | metG | CLPU_13c00350 | CLPU_2c02690 | Putative pyridoxal phosphate-dependent acyltransferase. | methionine--tRNA ligase MetG; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.892 |
KNF07693.1 | metH | CLPU_13c00350 | CLPU_21c00330 | Putative pyridoxal phosphate-dependent acyltransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.806 |
KNF07693.1 | metH4 | CLPU_13c00350 | CLPU_18c00060 | Putative pyridoxal phosphate-dependent acyltransferase. | Methionine synthase. | 0.806 |
KNF09099.1 | KNF07650.1 | CLPU_4c01450 | CLPU_14c00680 | Hypothetical protein. | Transcriptional regulatory protein. | 0.561 |
KNF09099.1 | KNF07693.1 | CLPU_4c01450 | CLPU_13c00350 | Hypothetical protein. | Putative pyridoxal phosphate-dependent acyltransferase. | 0.535 |
KNF09099.1 | KNF09179.1 | CLPU_4c01450 | CLPU_4c02250 | Hypothetical protein. | Glycosyltransferase. | 0.511 |
KNF09099.1 | KNF09527.1 | CLPU_4c01450 | CLPU_3c03070 | Hypothetical protein. | Transcriptional regulator/sugar kinase. | 0.443 |
KNF09099.1 | KNF09604.1 | CLPU_4c01450 | CLPU_2c00550 | Hypothetical protein. | Nucleoside-diphosphate-sugar epimerase. | 0.457 |
KNF09099.1 | KNF09651.1 | CLPU_4c01450 | CLPU_2c01020 | Hypothetical protein. | Glycosyltransferases involved in cell wall biogenesis. | 0.547 |
KNF09099.1 | KNF09846.1 | CLPU_4c01450 | CLPU_1c00110 | Hypothetical protein. | Putative transcriptional regulator. | 0.561 |
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