Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KNF08586.1 | KNF09160.1 | CLPU_6c00720 | CLPU_4c02060 | Lysophospholipase L1. | Hypothetical protein. | 0.500 |
KNF09160.1 | KNF08586.1 | CLPU_4c02060 | CLPU_6c00720 | Hypothetical protein. | Lysophospholipase L1. | 0.500 |
KNF09160.1 | KNF10154.1 | CLPU_4c02060 | CLPU_1c03190 | Hypothetical protein. | Phosphoribulokinase/uridine kinase. | 0.811 |
KNF09160.1 | cinA | CLPU_4c02060 | CLPU_5c01890 | Hypothetical protein. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.852 |
KNF09160.1 | guaA | CLPU_4c02060 | CLPU_2c00320 | Hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.804 |
KNF09160.1 | nadD | CLPU_4c02060 | CLPU_3c02130 | Hypothetical protein. | Putative nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.531 |
KNF09160.1 | pfkA | CLPU_4c02060 | CLPU_4c01790 | Hypothetical protein. | ATP-dependent 6-phosphofructokinase PfkA; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.487 |
KNF09160.1 | pncB | CLPU_4c02060 | CLPU_3c02530 | Hypothetical protein. | Nicotinate phosphoribosyltransferase PncB; Belongs to the NAPRTase family. | 0.475 |
KNF09160.1 | pyrF | CLPU_4c02060 | CLPU_21c00230 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.503 |
KNF09160.1 | thyX | CLPU_4c02060 | CLPU_10c00530 | Hypothetical protein. | Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.468 |
KNF09160.1 | upp | CLPU_4c02060 | CLPU_2c01780 | Hypothetical protein. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.475 |
KNF10154.1 | KNF09160.1 | CLPU_1c03190 | CLPU_4c02060 | Phosphoribulokinase/uridine kinase. | Hypothetical protein. | 0.811 |
KNF10154.1 | cinA | CLPU_1c03190 | CLPU_5c01890 | Phosphoribulokinase/uridine kinase. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.846 |
KNF10154.1 | guaA | CLPU_1c03190 | CLPU_2c00320 | Phosphoribulokinase/uridine kinase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.873 |
KNF10154.1 | nadD | CLPU_1c03190 | CLPU_3c02130 | Phosphoribulokinase/uridine kinase. | Putative nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.571 |
KNF10154.1 | pncB | CLPU_1c03190 | CLPU_3c02530 | Phosphoribulokinase/uridine kinase. | Nicotinate phosphoribosyltransferase PncB; Belongs to the NAPRTase family. | 0.570 |
KNF10154.1 | pyrF | CLPU_1c03190 | CLPU_21c00230 | Phosphoribulokinase/uridine kinase. | Orotidine 5'-phosphate decarboxylase PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.839 |
KNF10154.1 | upp | CLPU_1c03190 | CLPU_2c01780 | Phosphoribulokinase/uridine kinase. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.964 |
cinA | KNF09160.1 | CLPU_5c01890 | CLPU_4c02060 | Competence damage-inducible protein A; Belongs to the CinA family. | Hypothetical protein. | 0.852 |
cinA | KNF10154.1 | CLPU_5c01890 | CLPU_1c03190 | Competence damage-inducible protein A; Belongs to the CinA family. | Phosphoribulokinase/uridine kinase. | 0.846 |
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