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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF09169.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
KNF09185.1
Hypothetical protein.
 
     0.782
KNF09811.1
Hypothetical protein.
  
     0.772
KNF07022.1
DnaD/DnaB domain-containing replication protein.
  
     0.745
KNF07660.1
40-residue YVTN family beta-propeller repeat domain-containing protein.
  
     0.740
KNF07506.1
TPR repeat-containing protein.
  
     0.715
KNF09188.1
Hypothetical protein.
  
     0.703
KNF07911.1
Hypothetical protein.
  
     0.699
KNF09229.1
Putative membrane protein, TIGR04086 family.
  
     0.698
KNF07139.1
Hypothetical protein.
  
     0.697
spoIIP
Stage II sporulation P.
  
     0.682
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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