STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase AckA; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (419 aa)    
Predicted Functional Partners:
pduL
Propanediol utilization protein/phosphotransacetylase PduL; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
  
 0.989
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 
 0.953
nifJ-2
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 
 0.953
ywdH
Putative aldehyde dehydrogenase YwdH; Belongs to the aldehyde dehydrogenase family.
 
 
 0.903
lpdA
Dihydrolipoyl dehydrogenase LpdA.
  
 
 0.772
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
  
 
 0.709
pyc
Pyruvate carboxylase Pyc; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.693
pfl
Formate acetyltransferase Pfl.
  
 
 0.655
adh
NADPH-dependent butanol dehydrogenase Adh.
  
 
 0.648
KNF08768.1
Hypothetical protein.
  
    0.632
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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