STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08894.1Glycosyl transferase group 2 family protein. (365 aa)    
Predicted Functional Partners:
KNF08893.1
BclB C-terminal domain.
 
  
 0.877
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.854
atoS
Signal transduction histidine-protein kinase AtoS.
  
 0.841
KNF07693.1
Putative pyridoxal phosphate-dependent acyltransferase.
  
 0.724
fmt
methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.641
KNF07932.1
Histidinol-phosphate phosphatase family protein.
 
 
 0.628
KNF09651.1
Glycosyltransferases involved in cell wall biogenesis.
 
 
0.621
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
   
 
 0.604
nifJ-2
Pyruvate-flavodoxin oxidoreductase NifJ.
   
 
 0.604
KNF09604.1
Nucleoside-diphosphate-sugar epimerase.
  
 
 0.592
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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