STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08543.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
KNF08544.1
Bacteriophage tail assembly protein.
 
    0.954
KNF08549.1
Phage major capsid protein E.
 
  
 0.926
KNF08546.1
Phage portal protein, lambda family.
 
    0.920
KNF08547.1
Protease subunit of ATP-dependent Clp protease; Belongs to the peptidase S14 family.
 
    0.902
KNF08555.1
Phage tail tube protein FII.
 
   
 0.897
KNF08554.1
Phage tail sheath protein FI.
 
     0.894
KNF08563.1
Phage-like baseplate assembly protein.
 
     0.852
KNF08559.1
Hypothetical protein.
 
     0.851
KNF08564.1
Phage tail protein, P2 protein I family.
 
     0.835
KNF08565.1
Hypothetical protein.
 
   
 0.831
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.