Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KNF07640.1 | KNF08663.1 | CLPU_14c00580 | CLPU_6c01490 | NADH:flavin oxidoreductase, Old yellow enzyme family. | Thioredoxin domain-containing protein. | 0.916 |
KNF07640.1 | KNF09219.1 | CLPU_14c00580 | CLPU_4c02650 | NADH:flavin oxidoreductase, Old yellow enzyme family. | 3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.711 |
KNF07640.1 | lpdA | CLPU_14c00580 | CLPU_3c02700 | NADH:flavin oxidoreductase, Old yellow enzyme family. | Dihydrolipoyl dehydrogenase LpdA. | 0.995 |
KNF07640.1 | msrB | CLPU_14c00580 | CLPU_5c02600 | NADH:flavin oxidoreductase, Old yellow enzyme family. | Peptide methionine sulfoxide reductase MsrB. | 0.660 |
KNF07640.1 | trxB | CLPU_14c00580 | CLPU_1c02980 | NADH:flavin oxidoreductase, Old yellow enzyme family. | Thioredoxin reductase TrxB. | 0.943 |
KNF08388.1 | KNF08663.1 | CLPU_7c00160 | CLPU_6c01490 | Alkylmercury lyase. | Thioredoxin domain-containing protein. | 0.816 |
KNF08388.1 | KNF09219.1 | CLPU_7c00160 | CLPU_4c02650 | Alkylmercury lyase. | 3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.471 |
KNF08388.1 | lpdA | CLPU_7c00160 | CLPU_3c02700 | Alkylmercury lyase. | Dihydrolipoyl dehydrogenase LpdA. | 0.976 |
KNF08388.1 | msrB | CLPU_7c00160 | CLPU_5c02600 | Alkylmercury lyase. | Peptide methionine sulfoxide reductase MsrB. | 0.625 |
KNF08388.1 | trxB | CLPU_7c00160 | CLPU_1c02980 | Alkylmercury lyase. | Thioredoxin reductase TrxB. | 0.609 |
KNF08663.1 | KNF07640.1 | CLPU_6c01490 | CLPU_14c00580 | Thioredoxin domain-containing protein. | NADH:flavin oxidoreductase, Old yellow enzyme family. | 0.916 |
KNF08663.1 | KNF08388.1 | CLPU_6c01490 | CLPU_7c00160 | Thioredoxin domain-containing protein. | Alkylmercury lyase. | 0.816 |
KNF08663.1 | KNF09219.1 | CLPU_6c01490 | CLPU_4c02650 | Thioredoxin domain-containing protein. | 3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.854 |
KNF08663.1 | fliY | CLPU_6c01490 | CLPU_5c01320 | Thioredoxin domain-containing protein. | Flagellar motor switch phosphatase FliY. | 0.851 |
KNF08663.1 | lpdA | CLPU_6c01490 | CLPU_3c02700 | Thioredoxin domain-containing protein. | Dihydrolipoyl dehydrogenase LpdA. | 0.886 |
KNF08663.1 | msrA | CLPU_6c01490 | CLPU_1c03630 | Thioredoxin domain-containing protein. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.876 |
KNF08663.1 | msrB | CLPU_6c01490 | CLPU_5c02600 | Thioredoxin domain-containing protein. | Peptide methionine sulfoxide reductase MsrB. | 0.984 |
KNF08663.1 | nrdZ | CLPU_6c01490 | CLPU_10c00030 | Thioredoxin domain-containing protein. | Ribonucleoside-diphosphate reductase NrdZ; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.771 |
KNF08663.1 | rpoB | CLPU_6c01490 | CLPU_10c00660 | Thioredoxin domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.777 |
KNF08663.1 | trxB | CLPU_6c01490 | CLPU_1c02980 | Thioredoxin domain-containing protein. | Thioredoxin reductase TrxB. | 0.852 |
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