STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08689.1ABC transporter ATP-binding protein. (334 aa)    
Predicted Functional Partners:
KNF08688.1
Hypothetical protein.
     0.993
KNF08680.1
Putative Fe3+ ABC transporter periplasmic binding-like protein.
 
     0.829
KNF08687.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
     0.710
KNF08684.1
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
 
     0.595
KNF08686.1
Protein of unknown function DUF364; Hypothetical protein DUF364.
 
     0.559
KNF08682.1
ABC transporter periplasmic binding protein.
 
     0.521
KNF08690.1
Na+ driven multidrug efflux pump, MATE efflux family.
       0.479
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.