STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08452.1Negative regulator of beta-lactamase expression. (233 aa)    
Predicted Functional Partners:
KNF08451.1
Toxin secretion/phage lysis holin.
     0.919
KNF08450.1
Hypothetical protein.
 
     0.887
KNF08453.1
Hypothetical protein.
 
     0.885
KNF08446.1
Tape measure protein.
 
     0.860
KNF08448.1
Phage minor structural protein.
 
     0.855
KNF08455.1
Hypothetical protein.
 
     0.846
KNF08447.1
Putative phage tail protein.
 
     0.840
KNF08445.1
Hypothetical protein.
 
     0.830
KNF08442.1
Phage protein, HK97 gp10 family.
 
     0.829
KNF08443.1
Hypothetical protein.
 
     0.829
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.