STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08456.1Site-specific recombinase, DNA invertase. (523 aa)    
Predicted Functional Partners:
KNF08455.1
Hypothetical protein.
 
     0.946
KNF08453.1
Hypothetical protein.
 
     0.907
KNF08454.1
Site-specific recombinase, DNA invertase.
 
    
0.809
KNF08429.1
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.597
KNF08427.1
Phage terminase, small subunit.
 
    0.593
KNF08431.1
Hypothetical protein.
 
     0.565
KNF08451.1
Toxin secretion/phage lysis holin.
 
    0.561
KNF08433.1
Putative amidoligase enzyme.
 
     0.512
KNF08458.1
Restriction endonuclease.
  
    0.493
KNF08450.1
Hypothetical protein.
 
     0.490
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.