STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iadAIsoaspartyl dipeptidase IadA; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family. (381 aa)    
Predicted Functional Partners:
cphB
Cyanophycinase CphB; Belongs to the peptidase S51 family.
 
    0.890
cphA
Cyanophycin synthetase CphA.
 
     0.799
speB
Agmatinase SpeB; Belongs to the arginase family.
  
 
 0.664
fchA
Methenyltetrahydrofolate cyclohydrolase FchA.
  
 
  0.429
KNF07962.1
Putative transcriptional regulator.
  
 
 0.405
KNF09680.1
GntR family transcriptional regulator.
  
 
 0.405
KNF08512.1
Transcriptional regulator.
  
 
 0.405
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.