STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08295.1Protein of unknown function DUF2975; Hypothetical protein DUF2975. (164 aa)    
Predicted Functional Partners:
yozG
Putative HTH-type transcriptional regulator YozG.
 
     0.806
KNF07630.1
DNA binding domain, excisionase family.
  
     0.656
KNF08308.1
Hypothetical protein.
  
     0.588
KNF08609.1
Putative membrane protein; Probably functions as a manganese efflux pump.
  
     0.501
KNF08932.1
CAAX protease self-immunity.
  
     0.490
KNF08309.1
Hypothetical protein.
  
     0.481
KNF07847.1
Hypothetical protein.
  
     0.464
KNF10086.1
EcsC protein family.
  
     0.404
KNF08296.1
Putative transcriptional regulator.
       0.402
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.