STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNF08156.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
nagB
Glucosamine-6-phosphate deaminase NagB; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
       0.631
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.612
hydB
Iron hydrogenase HydB.
     
 0.562
KNF08155.1
YCII-like domain-containing protein.
       0.546
gltB
Archaeal-type glutamate synthase GltB; Belongs to the glutamate synthase family.
 
     0.526
KNF09283.1
NUDIX hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
    
 0.469
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
     
 0.449
nifJ-2
Pyruvate-flavodoxin oxidoreductase NifJ.
     
 0.449
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
   
    0.435
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.430
Your Current Organism:
Gottschalkia purinilytica
NCBI taxonomy Id: 1503
Other names: ATCC 33906, Clostridium purinilyticum, Clostridium purinolyticum, G. purinilytica, strain WA-1
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