STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO_000252Tip elongation aberrant protein 1. (572 aa)    
Predicted Functional Partners:
ESCO_004135
Synaptobrevin-like protein 2.
     
 0.585
ESCO_005251
E3 SUMO-protein ligase RanBP2.
    
  0.543
ESCO_006720
Putative Ras-related protein Rab7.
    
  0.526
ESCO_002188
Vesicular-fusion protein sec18.
    
  0.525
ESCO_001130
Protein phosphatase PP2A regulatory subunit A.
   
 0.514
ESCO_002498
Ribosome-interacting GTPase 1.
    
   0.499
ESCO_006597
DNA polymerase epsilon subunit B.
    
   0.468
ESCO_000289
Vacuolar protein sorting-associated protein 53-like protein.
     
 0.464
ESCO_005353
Putative ankyrin repeat protein.
    
 0.411
ESCO_003053
Putative mitochondrial ATP-dependent helicase irc3.
    
   0.408
Your Current Organism:
Escovopsis weberi
NCBI taxonomy Id: 150374
Other names: ATCC 64542, E. weberi
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.