STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO_002015Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (203 aa)    
Predicted Functional Partners:
ESCO_004341
Translation machinery-associated protein 22.
   
 
 0.984
ESCO_001617
Eukaryotic translation initiation factor eIF-1.
   
 
 0.834
ESCO_005715
Uncharacterized protein.
   
 
 0.834
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.688
ESCO_001127
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.687
ESCO_000345
40S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family.
   
   0.657
ESCO_001606
40S ribosomal protein S9.
   
 
 0.612
ESCO_000104
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.611
ESCO_000936
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.607
ESCO_004412
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
   0.605
Your Current Organism:
Escovopsis weberi
NCBI taxonomy Id: 150374
Other names: ATCC 64542, E. weberi
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