Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ESCO_001193 | ESCO_005927 | A0A0M8MXL0 | A0A0M9VRT6 | F-box domain-containing protein. | Ribosomal N-lysine methyltransferase 4. | 0.438 |
ESCO_001627 | ESCO_004662 | A0A0M9VWS4 | A0A0M9VRT0 | Ribosomal N-lysine methyltransferase set11. | Arginine N-methyltransferase 2. | 0.437 |
ESCO_001627 | ESCO_005927 | A0A0M9VWS4 | A0A0M9VRT6 | Ribosomal N-lysine methyltransferase set11. | Ribosomal N-lysine methyltransferase 4. | 0.456 |
ESCO_001673 | ESCO_004071 | A0A0M8MYQ3 | A0A0M8N5J2 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Prion formation protein 1. | 0.594 |
ESCO_001673 | ESCO_004662 | A0A0M8MYQ3 | A0A0M9VRT0 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Arginine N-methyltransferase 2. | 0.406 |
ESCO_001673 | ESCO_005927 | A0A0M8MYQ3 | A0A0M9VRT6 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Ribosomal N-lysine methyltransferase 4. | 0.478 |
ESCO_002275 | ESCO_005927 | A0A0M8N2B3 | A0A0M9VRT6 | Uncharacterized protein. | Ribosomal N-lysine methyltransferase 4. | 0.438 |
ESCO_003038 | ESCO_005927 | A0A0M8N052 | A0A0M9VRT6 | Uncharacterized protein. | Ribosomal N-lysine methyltransferase 4. | 0.438 |
ESCO_003168 | ESCO_004071 | A0A0M9VSC7 | A0A0M8N5J2 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Prion formation protein 1. | 0.846 |
ESCO_003168 | ESCO_004662 | A0A0M9VSC7 | A0A0M9VRT0 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Arginine N-methyltransferase 2. | 0.513 |
ESCO_003168 | ESCO_005828 | A0A0M9VSC7 | A0A0M8MZT9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.894 |
ESCO_003168 | ESCO_005927 | A0A0M9VSC7 | A0A0M9VRT6 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosomal N-lysine methyltransferase 4. | 0.457 |
ESCO_004071 | ESCO_001673 | A0A0M8N5J2 | A0A0M8MYQ3 | Prion formation protein 1. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.594 |
ESCO_004071 | ESCO_003168 | A0A0M8N5J2 | A0A0M9VSC7 | Prion formation protein 1. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.846 |
ESCO_004071 | ESCO_004662 | A0A0M8N5J2 | A0A0M9VRT0 | Prion formation protein 1. | Arginine N-methyltransferase 2. | 0.803 |
ESCO_004071 | ESCO_005828 | A0A0M8N5J2 | A0A0M8MZT9 | Prion formation protein 1. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.914 |
ESCO_004071 | ESCO_005927 | A0A0M8N5J2 | A0A0M9VRT6 | Prion formation protein 1. | Ribosomal N-lysine methyltransferase 4. | 0.566 |
ESCO_004662 | ESCO_001627 | A0A0M9VRT0 | A0A0M9VWS4 | Arginine N-methyltransferase 2. | Ribosomal N-lysine methyltransferase set11. | 0.437 |
ESCO_004662 | ESCO_001673 | A0A0M9VRT0 | A0A0M8MYQ3 | Arginine N-methyltransferase 2. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.406 |
ESCO_004662 | ESCO_003168 | A0A0M9VRT0 | A0A0M9VSC7 | Arginine N-methyltransferase 2. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.513 |
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