STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO_000770tRNA-dihydrouridine(20) synthase. (412 aa)    
Predicted Functional Partners:
ESCO_005960
Putative glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.785
ESCO_003992
Putative proline--tRNA ligase.
  
 
 0.784
ESCO_002954
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.626
ESCO_002587
Uncharacterized protein.
   
 
 0.588
ESCO_002153
tRNA pseudouridine(38/39) synthase.
  
 
 0.573
ESCO_002391
tRNA-dihydrouridine(16/17) synthase.
   
  
0.572
ESCO_002049
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.
  
 
 0.563
ESCO_006640
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.561
ESCO_005992
Putative methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.556
ESCO_001045
Uncharacterized protein.
   
    0.553
Your Current Organism:
Escovopsis weberi
NCBI taxonomy Id: 150374
Other names: ATCC 64542, E. weberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.